From Results Table --> get code --> Java. The file that is save called cod

getcode file empty? about intermine HOT 2 CLOSED

intermine commented on May 22, 2024

getcode file empty?

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Comments (2)

julie-sullivan commented on May 22, 2024

This is working for me on the test yeastmine (although I notice you are using an older version of the code).

ChromosomeRegion_AllGenes - this template produced Javascript:

<html>
<!-- This is an automatically generated code snippet to run your query
 using the intermine JavaScript client library. It is assumed that you
 will be wanting to run this query from a webpage, and so the code is
 formatted such that you can just cut and paste it into any webpage -->

<head>
<link type="text/css" rel="stylesheet" href="null/css/bootstrap.css"></link>
<link type="text/css" rel="stylesheet" href="null/css/tables.css"></link>
<link type="text/css" rel="stylesheet" href="null/lib/css/flick/jquery-ui-1.8.19.custom.css"></link>
<link type="text/css" rel="stylesheet" href="null/lib/google-code-prettify/prettify.css"></link>
<script src="null/lib/jquery-1.7.js"></script>
<script src="null/lib/underscore-min.js"></script>
<script src="null/lib/backbone.js"></script>
<script src="http://yeastmine-test.yeastgenome.org/yeastmine-dev//js/im.js"></script>
<script src="null/js/deps.js"></script>
<script src="null/js/imtables.js"></script>
<script type="text/javascript">
(function($) {
    var query = {"model":{"name":"genomic"},"select":["Gene.chromosome.primaryIdentifier","Gene.primaryIdentifier","Gene.secondaryIdentifier","Gene.featureType","Gene.symbol","Gene.name","Gene.sgdAlias","Gene.organism.shortName","Gene.chromosomeLocation.start","Gene.chromosomeLocation.end","Gene.chromosomeLocation.strand","Gene.description"],"constraintLogic":"(A or B) and C and D and E and (F or G) and I","orderBy":[{"Gene.primaryIdentifier":"ASC"}],"where":[{"path":"Gene.featureType","op":"!=","code":"I","value":"not in systematic sequence of S288C"},{"path":"Gene.qualifier","op":"IS NULL","code":"G","value":"IS NULL"},{"path":"Gene.qualifier","op":"!=","code":"F","value":"Dubious"},{"path":"Gene.status","op":"IS NULL","code":"B","value":"IS NULL"},{"path":"Gene.status","op":"=","code":"A","value":"Active"},{"path":"Gene.chromosome.primaryIdentifier","op":"=","code":"C","value":"chrXIV"},{"path":"Gene.chromosomeLocation.start","op":">=","code":"D","value":"1"},{"path":"Gene.chromosomeLocation.end","op":"<=","code":"E","value":"20000"}]};
    var service = new intermine.Service({
        root: "http://yeastmine-test.yeastgenome.org/yeastmine-dev/",
     // token: "YOUR-TOKEN-HERE"
    });

    $(function() {
      var view = new intermine.query.results.CompactView(service, query);
      view.$el.appendTo('#query-table-container-5');
      view.render();
    });
})(jQuery);
</script>
</head>
<body>
  <div id="query-table-container-5"></div>
</body>
</html>

from intermine.

julie-sullivan commented on May 22, 2024

This is now working in yeastmine-dev.

from intermine.

getcode file empty? about intermine HOT 2 CLOSED

Comments (2)

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