Comments (2)
corneliusroemer
commented on August 11, 2024
Ok, I've figured it out
The root cause is me - but the error message is misleading/false.
I included one sample twice in the constraint tree: BA.2.3
When removing the duplicate element from the constraint tree, it all works.
So what needs to be changed is that when parsing the constraint tree you throw an error: duplicate taxa detected in constraint tree, named BA.2.3
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corneliusroemer
commented on August 11, 2024
Notably, the error is thrown not even naming which sequence is duplicate - misleading the user.
I just ran into this again - as I'm hand-writing a pretty large .nwk so these issues are bound to happen. Would be great if there was a good constraint tree nwk validator.
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Related Issues (20)
- Options missing from CLI help HOT 1
- Crash when inferring a tree on a simple alignment HOT 1
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