Comments (13)
I ran it in "TestData/NaSbF6"
and get AttributeError: 'tuple' object has no attribute 'atoms'
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I ran it in "TestData/NaSbF6"
and get
AttributeError: 'tuple' object has no attribute 'atoms'
Seems it could probably stem from pymatgen ?
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Now, with the latest pymatgen, it works. I think a fix would be to require a newer pymatgen version.
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I have updated the pymatgen version number for now and we have to make sure we keep this updated in the future.
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Can you post the error please ? For my local repo with current master branch it works
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This is strange. It works fine for me without error. I just checked for both cation-anion
andall
bonds mode
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I will make a fresh environment and then see.
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But we need a test to make sure it doesn't break again. ;)
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But we need a test to make sure it doesn't break again. ;)
I do not know tbh, what kind of test will need to be written for such a case. Any ideas ?
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Do we test the label-resolved plotter? You could simply test if you can execute the command with the testfolder I mentioned above.
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Do we test the label-resolved plotter? You could simply test if you can execute the command with the testfolder I mentioned above.
Yes, we do that test. Just not in CLI, but normal Python interface. If it does not work, it will get caught in there if something is wrong with pymatgen version
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I used a fresh environment and installed LobsterPy. Then an older pymatgen version was installed and it failed. Our test should then be failing as well, shouldn't it?
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I used a fresh environment and installed LobsterPy. Then an older pymatgen version was installed and it failed. Our test should then be failing as well, shouldn't it?
Yes it should fail definitely. Will see what's happening
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Related Issues (20)
- pip installation fails HOT 6
- Information on how to run the tests HOT 6
- Suggestions for JOSS paper HOT 4
- Add arg that allows to change default cutoff_icohp in BatchStructureGraphs
- Batch featurizer breaks down when gz file for POSCAR does not exist
- Improve help doc-string for create-inputs cli and add example
- Consider improvements to reducing testing time HOT 2
- Update pytest durations file
- `lobsterpy plot-automatic-ia -orbplot` does not work HOT 6
- Lobsterpy does not work if only POSCAR.lobster exists
- Automatic anlysis does not work in cli for spin polarized computations HOT 1
- Orbital contributions should be summed by orbital type HOT 2
- Fatband plots
- Large number of environments break the automatic plot HOT 1
- Plot does not save png correctly
- Code of conduct HOT 2
- Speed up installation
- Tests for multi-center bonding plotting features
- Edge features from LobsterNeighbors
- Reduce warnings raised during calc quality analysis
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