Giter Site home page Giter Site logo

Comments (5)

James-Thorson avatar James-Thorson commented on August 15, 2024

OK, I've partially addressed this request in two ways:

  1. I've added a new function Summary( Obj ), which will be expanded to
    output a battery of useful and interpretable results, which are documented
    using ?SpatialDeltaGLMM::Summary. Right now, it contains D_xt (density
    at each knot and year), which I imagine is most important for plotting.
  2. I've changed PlotResultsOnMap_Fn to invisibly return the object that
    it's plotting last for a given plot_set input (and have also added
    documentation for what these mean). So e.g.,
PlotResultsOnMap_Fn( plot_set=c(3,10), ... )

will plot predicted log-density and the CV of density, but it will return
the CV of density in matrix form.

  1. I earlier added a new feature plot_set=10 which plots the predicted
    CV of density, which will only run if
    Data_Fn(...,Options=c('SD_site_logdensity'=1,...)).

Jim

On Fri, Sep 9, 2016 at 1:02 PM, Paul Dolder [email protected]
wrote:

Jim,

In addition to the functionality to produce maps, it would be good to be
able to extract the spatial density estimates into a dataframe for external
plotting.

Thanks,
Paul


You are receiving this because you are subscribed to this thread.
Reply to this email directly, view it on GitHub
#2, or mute the thread
https://github.com/notifications/unsubscribe-auth/AHnqTbuCx7RkY14CWqo_PrylG-PUc1PUks5qobtOgaJpZM4J5aEQ
.

from vast.

pdolder avatar pdolder commented on August 15, 2024

Great, thanks! Will test and let you know any issues

from vast.

pdolder avatar pdolder commented on August 15, 2024

Jim,

Think (1) (Summarize not Summary ??) is not working correctly. Haven't tested on Obj, as I hadn't saved this from the run...but should this extract D_xct from the Report (which I had saved) not D_xt ?

from vast.

James-Thorson avatar James-Thorson commented on August 15, 2024

Sorry, I'll need more details here...

But yes, I changed it to Summarize (avoid namespace conflicts with base and utils). And yes it currently only extracts D_xct (Summarize in the single species package SpatialDeltaGLMM extracts D_xt)

.. are you saying you get an error when using the function?

from vast.

pdolder avatar pdolder commented on August 15, 2024

No, sorry - I haven't an Obj to test it on at the moment (only saved Report, ParHat etc.. ) so haven't tested the function directly. I had assumed the D_xct / D_xt issue was a typo....as it is not I've no doubt it will work fine.... will confirm

from vast.

Related Issues (20)

Recommend Projects

  • React photo React

    A declarative, efficient, and flexible JavaScript library for building user interfaces.

  • Vue.js photo Vue.js

    🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.

  • Typescript photo Typescript

    TypeScript is a superset of JavaScript that compiles to clean JavaScript output.

  • TensorFlow photo TensorFlow

    An Open Source Machine Learning Framework for Everyone

  • Django photo Django

    The Web framework for perfectionists with deadlines.

  • D3 photo D3

    Bring data to life with SVG, Canvas and HTML. 📊📈🎉

Recommend Topics

  • javascript

    JavaScript (JS) is a lightweight interpreted programming language with first-class functions.

  • web

    Some thing interesting about web. New door for the world.

  • server

    A server is a program made to process requests and deliver data to clients.

  • Machine learning

    Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.

  • Game

    Some thing interesting about game, make everyone happy.

Recommend Org

  • Facebook photo Facebook

    We are working to build community through open source technology. NB: members must have two-factor auth.

  • Microsoft photo Microsoft

    Open source projects and samples from Microsoft.

  • Google photo Google

    Google ❤️ Open Source for everyone.

  • D3 photo D3

    Data-Driven Documents codes.