Comments (4)
Will generate benchmark of dense SWCs on Janelia instance to compare import load times.
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Importing set of 2355 neurons into HortaCloud took 2:15. Same set imported into Janelia instance took 16 seconds, about 8 times faster.
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I did a test for Hortacloud with the same set of neurons but from local disk. It took about 20-21 seconds. A bit slower, but clearly s3fs is causing some issues for the swc import.
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the running time SWCImport service of /data/s3/janelia-mouselight-imagery/reconstructions/2018-10-01/build-brain-output/frags-with-5-or-more-nodes/as-swcs.tar
that contains ~110K SWC entries was ~10s from the time the service was queued to the time it was completed. This was done using Postman not from the workstation.
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Related Issues (20)
- Delete unused code from jacs-messaging
- Google Drive folder disappears
- issue with right-click not actually selecting a neuron in Horta3D, leading to errors in neuron deletes HOT 2
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- Intermittent issues with location of exported SWCs not respecting the origin/transformation settings for the sample HOT 1
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