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Jeňa Kočí's Projects

bamaddrg icon bamaddrg

adds sample names and read-group (RG) tags to BAM alignments

cnefinder icon cnefinder

CNEFinder: Finding Conserved Non-coding Elements in Genomes

codes-for-life icon codes-for-life

toy repository for testing coding concepts in several languages of interest, focusing on problems in life sciences

popgen.awk icon popgen.awk

Collection of awk scripts for population & evolutionary genomics. Maybe a library later.

rnb icon rnb

R'n'B(ioinformatics)

scripts icon scripts

Scripts for analysis used during the course

thursdays icon thursdays

Thursdays with bioinformatics at University of Ostrava

tree-subset-shiny icon tree-subset-shiny

This repo contains the code for a shiny app that allows for visualization of subset phylogenetic trees

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