jaredslosberg Goto Github PK
Type: User
jaredslosberg's Projects
6month_ens
Analysis of scRNA from 6month LMMP
bcmb_bootcamp
Repo for BCMB Computational Bootcamp Course in Fall of 2020
chess_viz
Messing around with python chess packages and visualizations
convert_sc_format
Convert monocle cds object to anndata .h5ad format
get_sra_fastqs
Snakemake workflow to grab raw fastqs from SRA from SRR, SRX, SRP, or PJRNA accession numbers
gofflab_sc_kallisto
Single Cell Preprocessing workflow for Kallisto + RNAVelocity for Goff Lab Projects
gssg
Gene Set + S2G strategy annotations analyzed for disease architecture
jaredslosberg.github.io
kallistobus-workflow
Barebones velocity-compatible kallisto bus workflow to generate count matrices
my_tidy_tuesday
Visualizations and code for R4DS Tidy Tuesday
myfirstproject
test test
nmf_simulations
generation of simulated NMF patterns and resulting expression matrices
projectr
rstudio-server-conda
Run Rstudio Server in a conda environment
scvisualizer
Accessory package for visualizing gene expression in scRNA-seq data
tidytuesday
Official repo for the #tidytuesday project
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