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Jean-Baptiste Lamouche photo

jbaptistelam Goto Github PK

followers: 3.0 following: 14.0 repos: 9.0 gists: 1.0

Name: Jean-Baptiste Lamouche

Type: User

Company: Strasbourg University Hospital, Centre de recherche en biomédecine de Strasbourg

Bio: Bioinformatician working in computational biology field especially in genetics diagnosis and medical research

Location: Strasbourg

Jean-Baptiste Lamouche's Projects

annotsv icon annotsv

Annotation and Ranking of Structural Variation

howard icon howard

HOWARD annotates (using ANNOVAR and snpEff) and prioritizes (rules to Flag and Score) genetic variations, calculates and normalizes annotations, translates and export VCF format (into VCF or TSV) and generates variants statistics (bcftools and snpEff)

ionnipt icon ionnipt

ThermoFisher Ion Torrent plugin to detect fetal trisomies and estimate fetal fraction

pyvcf3 icon pyvcf3

A Variant Call Format reader for Python.

spliceai icon spliceai

A deep learning-based tool to identify splice variants

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