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Jake Bowden's Projects

bgc_2_tree icon bgc_2_tree

Bioinformatics pipeline to generate phylogenetic trees from BGC genbank records using Nextflow

bigg_2_inchi icon bigg_2_inchi

Fetch InChi strings from a metabolite's BiGG identifier

cg4-predictor icon cg4-predictor

Predictor of ChemGauss4 docking score from molecular features

coppice icon coppice

Python decision tree and ensemble package using a rust backend.

csd_doi_checker icon csd_doi_checker

Using the CSD API, check whether there are structure database entries for specified DOIs

gpt2-prot icon gpt2-prot

GPT2 implementation for modelling of biological sequences at AA/NT resolution

m5-team-4 icon m5-team-4

RBS strength optimisation on Opentrons OT-2

rd_py icon rd_py

Reaction diffusion model and Turing patterns

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