jdemeul Goto Github PK
Name: Jonas Demeulemeester
Type: User
Company: University of Leuven
Twitter: zeunas
Location: Leuven, Belgium
Jonas Demeulemeester's Projects
ansible-playbooks
Repo for ansible playbooks
ascat
ASCAT copy number R package
ase_analysis
Tools for analysis of Allele Specific Expression in T-ALL and AML
battenberg
Battenberg R package for subclonal copynumber estimation
blr
dl_sandbox
dockerfiles
Repo containing docker files forming the base of various pipelines
easybuild-easyconfigs
A collection of easyconfig files that describe which software to build using which build options with EasyBuild.
easybuild-easyconfigs-devel
Development repo for new EasyBuild easyconfigs
elasticluster
Create clusters of VMs on the cloud and configure them with Ansible.
gc-replication_correct
Correcting for replication timing effects in LogR
hapdup
Pipeline to convert a haploid assembly into diploid
homdels
infinitesites
Simulator and analysis of Infinite Sites Assumption breakdown
kataegis
Tools for identifying and timing kataegis events in PCAWG data
mutationtime.r
An R script to time somatic mutations
nanowgs
Nextflow pipeline for Nanopore WGS analysis
pcawg-docker-test
Scripts to help test Dockstore tools for PCAWG
smmip-tools
souporcell
Clustering scRNAseq by genotypes
transmissiblecancertools
wf-single-cell
wfa2tenx
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