Comments (1)
The value is the number of input marks. The fifth value is the number of EM iterations.
from chromhmm.
Related Issues (20)
- discrepancy between X_Y_overlap.png and X_Y_overlap.txt HOT 2
- nullpointerexception error while running CompareModels HOT 2
- Exception` in thread "main" java.util.zip.ZipException: invalid distance too far back HOT 4
- Exception in thread "main" java.lang.UnsatisfiedLinkError: HOT 7
- output truncates chromosomes HOT 4
- WGBS binarization HOT 3
- Binarized data HOT 2
- Coverage as Learnmodel input feature HOT 7
- ConvertGeneTable: Exception in thread "main" java.lang.IllegalArgumentException: invalid strand HOT 4
- Error when using ConvertGeneTable function HOT 3
- OverlapEnrichment in LearnModel and standalone gives different results HOT 2
- Only the first 10% of the contigs outputted HOT 2
- chromHMM input choice and annotation of external bed file HOT 1
- Base from OverlapEnrichment command HOT 4
- how to choose the way of binarization, independently, concatenated or stacking? HOT 2
- Reorder genomic annotations and TSS neighborhood HOT 2
- Abnormal annotation at the end of some chromosomes when using LearnModel command HOT 2
- On this data the INFORMATION initialization strategy can only support 4 states HOT 9
- NeighborhoodEnrichment error HOT 2
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from chromhmm.