jhennies Goto Github PK
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jhennies's Projects
amst
Alignment to Median Smoothed Template for FIB-SEM data
bioimage-io-models
Model repository for bioimage.io
blender-python-utils
boost_py_lib
cebraem
cnn_pg_36_exp
core-bioimage-io-python
Python libraries for loading, running and packaging bioimage.io models
cpp_devel
cremi_python_exp
elf
Utils and convenience functions for large-scale bio-image analysis.
embl_upscaling_project
git_btm2017
Example used for the git course given at the EMBL btm 2017
ice_thickness_cryosol
Rene Henderikx, Maaike Schotman - Cryosol; Simon Fromm, Simone Mattei - ICEM
ilastik
ilastik-shell, applets, and workflows to string them together.
jh_develop
lazyflow
lazy parallel ondemand zero copy numpy array data flows with caching and dirty propagation
mobie-utils-python
Python tools for MoBIE
napari
napari: a fast, interactive, multi-dimensional image viewer for python
nature_methods_multicut_pipeline
nmmp_experiments
orthos
orthos
py_devel
pybdv
python tools for BigDataViewer
pyelastix
Thin wrapper around elastix - a toolbox for rigid and nonrigid registration of images
pytorch_membrane_net
snamst
AMST implementation using Snakemake workflow management
squirrel
supervoxel_merging
unet
unet for image segmentation
vigra
a generic C++ library for image analysis
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