jihuawur Goto Github PK

abhgenotyper

The ABHgenotypeR R package to easily visualize and manipulate ABH genotypes

bringing-old-photos-back-to-life

Bringing Old Photo Back to Life (CVPR 2020 oral)

causaldb-finemapping-pip

A GWAS fine-mapping pipeline used in CAUSALdb

ceris_jgra

clash

A rule-based tunnel in Go.

courses

Course materials for the Data Science Specialization: https://www.coursera.org/specialization/jhudatascience/1

cv

My CV built using RMarkdown and the pagedown package.

email-helper

Generate your business emails in seconds (by OpenAI)

exploratory_data_analysis

faster

Fast Lane to Learning R!

finemap

functional_haplotype_gwas

Selecting closely-linked SNPs based on local epistatic effects for haplotype construction improves power of association mapping

genomics-research

Google-Health genomics-research

genomics_scripts

Random genomics scripts that I've used at one point or another

gfpgan

GFPGAN aims at developing Practical Algorithms for Real-world Face Restoration.

gwas

Genome-wide Association Study Tutorial

intro_to_r

Introduction to R

kernelmethods

Core of functions to build gaussian kernel, arc-cosine and GBLUP with additive, dominance effects and environmental information

lama-cleaner

Image inpainting tool powered by SOTA AI Model. Remove any unwanted object, defect, people from your pictures or erase and replace(powered by stable diffusion) any thing on your pictures.

ldblockshow

LDBlockShow: a fast and convenient tool for visualizing linkage disequilibrium and haplotype blocks based on VCF files

ldsc

LD Score Regression (LDSC)

machine-learning-for-grain-assaying

This project aims at creating mobile based solutions for scientific grading/assaying of food grains. Aim is to be used in e-National Agriculture Market (NAM)

maizehtp

We developed an automated high-throughput phenotyping platform (HTP) and used to quantify image-based traits (i-traits) for 228 maize inbred lines across all developmental stages.

merge_plink

merge two genotype datasets in PLINK format

my_scripts

nlnccirsmk

Pipeline for lncRNA, Circular RNA, and novel mRNA identification.

populus_genomic_prediction_climate_vulnerability

qtl-seq

QTL-seq pipeline to identify causative mutations responsible for a phenotype

rainbowr

Reliable Association INference By Optimizing Weights with R (R package for SNP-set GWAS and multi-kernel mixed model)

rblast

Interface for the Basic Local Alignment Search Tool (BLAST) - R-Package