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alphafold

Open source code for AlphaFold.

bedanno

Annotate genomics variations of hg19 by using a BED format database, which construct from NCBI annotation release 104

bmsisea

Detection of micro-satellite instability from circulating tumor DNA by targeted deep sequencing

bpp

deeplearning

深度学习入门教程, 优秀文章, Deep Learning Tutorial

deeplearning-500-questions

深度学习500问，以问答形式对常用的概率知识、线性代数、机器学习、深度学习、计算机视觉等热点问题进行阐述，以帮助自己及有需要的读者。 全书分为18个章节，50余万字。由于水平有限，书中不妥之处恳请广大读者批评指正。 未完待续............ 如有意合作，联系[email protected] 版权所有，违权必究 Tan 2018.06

delly

DELLY2: Structural variant discovery by integrated paired-end and split-read analysis

fqtool

A useful fastq processing tool revised from fastp

gencore

Generate consensus reads to reduce sequencing noises and remove duplications

giremi

GIREMI is a method that can identify RNA editing sites using one RNA-seq data set without requiring genome sequence data.

msisensor

Microsatellite instability detection using tumor only data.

qedit

RNA editing quantification in deep transcriptome data

reditools

REDItools are python scripts to investigate RNA editing at genomic scale.

reditools2

sjm

Simple Job Manager

testgit