johandahlberg Goto Github PK
Name: Johan Dahlberg
Type: User
Company: Working at Pixelgen Technologies
Twitter: genomicsdev
Location: Uppsala
Johan Dahlberg's Projects
algebird
Abstract Algebra for Scala
ansible-elk
Ansible role for Elasticsearch ELK Stack
ansible-st2
Ansible playbooks to deploy StackStorm
ansible_spark_openstack
Instructions and Ansible playbooks for deploying a Spark stand-alone cluster on OpenStack
arteria-bcl2fastq
Provides a simple http-interface for Illumina bcl2fastq
arteria-checksum
Service for checking md5sums
arteria-core
The arteria python module is a library of helper classes for the Arteria project.
arteria-delivery
Micro-service to carry out deliveries on Uppmax
arteria-incubation
Work-in-progress for the upcoming new and improved Arteria packs.
arteria-lib
Contains the arteria core python library as well as smaller services.
arteria-packs
StackStorm packs to automate sequencing center operations
arteria-project.github.io
The Arteria project organization page: http://arteria-project.github.io
arteria-provisioning
Provisioning for the Arteria project
arteria-runfolder
A webservice used to monitor runfolders from Illumina instruments and check what state they are in (e.g. ready to process or not).
arteria-siswrap
Wraps scripts from Sisyphus (https://github.com/Molmed/sisyphus) with a http-interface.
awesome-10x-genomics
List of tools and resources related to the 10x Genomics GEMCode/Chromium system
awesome-cancer-variant-databases
A community-maintained repository of cancer clinical knowledge bases and databases focused on cancer variants.
awesome-public-datasets
An awesome list of high-quality open datasets in public domains (on-going).
aws-cdk
The AWS Cloud Development Kit is a framework for defining cloud infrastructure in code
bakka
akka + bams = bakka
bestpracticeslides
Repo for the code used in the MolMed TechTalk about best practices in scientific computing.
checkqc
checkQC inspects the content of a runfolder and determines if it passes a set of quality criteria
clarity-ext
Extensions for Clarity
claritylims
Customizations for our GenoLogics BaseSpace Clarity LIMS
contadamination
Hacking away on bloom filters and adam...
courses
Course homepages for some of the courses given at SciLifeLab
curiouscrows
Team repository for the Curious Crows for Hack4Sweden 2016
cwltool
Common Workflow Language reference implementation
django
The Web framework for perfectionists with deadlines.
django-rest-framework
Web APIs for Django. 🎸
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