johnnychen1113 Goto Github PK

3d-dna_pipeline_for_4_enzyme_arima

Adapted 3d-dna pipeline for 4 enzyme cocktail arima Hi-C toolkit

autobsgenome

A python warp of BSgenome. Build BSgenome just like fill in a questionnaire!

awesome-ml-dl-for-genomics

An Awesome Collection of Resources for Machine Learning & Deep Learning in Genomics

bioconda-recipes

Conda recipes for the bioconda channel.

biofx_python

Code for Mastering Python for Bioinformatics (O'Reilly, 2021, ISBN 9781098100889)

bioinfo_scripts

A collection for my daily bioinformatics scripts.

bioinfoalgorithm

Algorithms for Bioinformatics

chatgpt-next-web

深度适配API2D的ChatGPT-Next-Web，已经实现了双APIKey的代理切换

chathub

All-in-one chatbot client

codeinterpreter-api

Open source implementation of the ChatGPT Code Interpreter 👾

cogent

Coding Genome Reconstruction using Iso-Seq data

deerect-tss_release

This repository contains the implementation of DeeReCT-TSS

dn

Daily notes command line tool

easytss

A pipeline for process all TSS related data (CAGE, TSS-seq, TIF-seq etc.) easily.

fastss

A user friendly machine learning based software to predict TSS in prokaryote and eukaryote

faultier-cv

Build a CV in a few minutes in your browser.

genomesyn

We developed GenomeSyn as a new tool for constructing and visualizing genome synteny, its novel design and implementation can serve as a necessary complement to the study of genomic synteny and structural variation and its visualization tools.

gpt-code-ui

An open source implementation of OpenAI's ChatGPT Code interpreter

gpt_academic

为ChatGPT/GLM提供实用化交互界面，特别优化论文阅读/润色/写作体验，模块化设计，支持自定义快捷按钮&函数插件，支持Python和C++等项目剖析&自译解功能，PDF/LaTex论文翻译&总结功能，支持并行问询多种LLM模型，支持chatglm2等本地模型。兼容文心一言, moss, llama2, rwkv, claude2, 通义千问, 书生, 讯飞星火等。

gridengine

Son of Grid engine

hds5210-2022

Main class repository for HDS5210-2022

hic-scaffolding-nf

Nextflow pipeline for scaffolding genome assemblies with Hi-C reads

hicexplorer_scripts

The hicexplorer scripts I used

in-depth-ngs-data-analysis-course

Materials for 12-day course on analyzing RNA-Seq, ChIP-Seq and variant calling data.

joyful-pandas

pandas中文教程

juicebox_scripts

A collection of scripts for working with Hi-C data, Juicebox, and other genomic file formats

linlab_training

my_genome_assembly_scripts

phylotree.js

Interactive viewer of phylogenetic trees

resume-json-pdf

基于自定义 JSON 数据的在线简历生成器 | an online generator that builds your résumé from custom JSON files and converts them into PDF / HTML format, developed by Tailwind CSS + React