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Name: Joaquin
Type: User
Company: @Ay-lab
Location: UC San Diego & La Jolla Institute of Immunology
Name: Joaquin
Type: User
Company: @Ay-lab
Location: UC San Diego & La Jolla Institute of Immunology
Analyzing ATAC-seq data to find ecDNA
Bioinformaticians take for granted so many standardized datasets. Let's pay more attention to those neat details.
Analysis pipelines.
Attempting to install and run the ChIPLine Pipelin
Chromatin loops can connect genetic elements together, this package attempt to do the same at the data-level and builds on tools such as pybedtools.
Applying jDR methods to CMI-PB
CMI-PB tutorial for contestants.
Bioinformatics algorithms
As the Ay Lab we are competing in the DChallenge where we are looking SNPs colocalizing for T1D and expression and integrating this with HiChIP interactions.
Testing DNA 3D structure software for PASTIS data
HiC-Pro: An optimized and flexible pipeline for Hi-C data processing
Testing out various loop callers
HiCnv is used to call copy number variations and breakpoints from Hi-C data
Improving my linux practice through mini-tutorials
Paired Genomic Loci Tool Suite
Adding an additional GWAS-like plot
Personal best practices with Snakemake
Snakemake tutorial
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TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
An Open Source Machine Learning Framework for Everyone
The Web framework for perfectionists with deadlines.
A PHP framework for web artisans
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
Some thing interesting about web. New door for the world.
A server is a program made to process requests and deliver data to clients.
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
Some thing interesting about visualization, use data art
Some thing interesting about game, make everyone happy.
We are working to build community through open source technology. NB: members must have two-factor auth.
Open source projects and samples from Microsoft.
Google ❤️ Open Source for everyone.
Alibaba Open Source for everyone
Data-Driven Documents codes.
China tencent open source team.