joscolgan Goto Github PK
Name: Joe Colgan
Type: User
Company: JGU Mainz
Bio: Group Leader at JGU Mainz (DE). Previous postdoc positions: Reed lab (UCC; IE); Wurm lab (QMUL; UK)
Twitter: HibernoGruppe
Location: Mainz, Germany
Name: Joe Colgan
Type: User
Company: JGU Mainz
Bio: Group Leader at JGU Mainz (DE). Previous postdoc positions: Reed lab (UCC; IE); Wurm lab (QMUL; UK)
Twitter: HibernoGruppe
Location: Mainz, Germany
repo for code to implement allele-specific gene expression model of Skelly et al. 2011 Genome Res https://dx.doi.org/10.1101/gr.119784.110
Course materials for BIOST561
Scripts for the analysis of RNA-seq datasets generated for the manuscript "Unexpected worker mating and colony-founding in a superorganism."
Signatures of adaptation, constraints, and potential redundancy in the canonical immune genes of a key pollinator
Caste- and pesticide-specific effects of neonicotinoid pesticide exposure on gene expression in bumblebees
Genomics of adaptation to a changing world in a wild bumblebee
Mating precedes selective immune priming which is maintained throughout bumblebee queen diapause.
Filter reads from a FASTQ file using a list of identifiers.
A set of functions to visualise genotypes based on a VCF
HaploGrep - mtDNA haplogroup classification. Supporting rCRS and RSRS.
Config files for my GitHub profile.
Github Pages template for academic personal websites, forked from mmistakes/minimal-mistakes
Tutorials on how to use pandas effectively to do data analysis
Current Challenges and Best Practice Protocols for Microbiome Analysis using Amplicon and Metagenomic Sequencing
Phylogenetic orthology inference for comparative genomics
Pipeline for differential gene expression (DGE) and differential transcript usage (DTU) analysis using long reads
R package for analysing proteomics data
Comprehensive list of color palettes available in r โค๏ธ๐งก๐๐๐๐
This is a simple static research lab website template which can be used by college students / professors.
RNA-seq workflow using STAR and DESeq2
Salmo smoltification RNA-seq study
Evolution and expression of the immune system of a facultatively anadromous salmonid
Infection by the castrating parasitic nematode Sphaerularia bombi changes gene expression in Bombus terrestris bumblebee queens
Toolset for SV simulation, comparison and filtering
A NetLogo extension that brings date/time utilities and discrete event scheduling to NetLogo
A declarative, efficient, and flexible JavaScript library for building user interfaces.
๐ Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
An Open Source Machine Learning Framework for Everyone
The Web framework for perfectionists with deadlines.
A PHP framework for web artisans
Bring data to life with SVG, Canvas and HTML. ๐๐๐
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
Some thing interesting about web. New door for the world.
A server is a program made to process requests and deliver data to clients.
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
Some thing interesting about visualization, use data art
Some thing interesting about game, make everyone happy.
We are working to build community through open source technology. NB: members must have two-factor auth.
Open source projects and samples from Microsoft.
Google โค๏ธ Open Source for everyone.
Alibaba Open Source for everyone
Data-Driven Documents codes.
China tencent open source team.