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Hi! I'm an open source maintainer working for the NeuroPoly research lab at Polytechnique Montreal. 👋

For the past 3 years, I've maintained the Spinal Cord Toolbox, a highly-regarded Python-based software package in a niche, data-driven research field. Our user base is small but meaningful; we serve the needs of medical researchers by providing them with a wealth of spinal cord image processing tools, with our work serving as the backbone for countless vital clinical studies published in many high-impact journals.

Joshua Newton's Projects

cython-lda icon cython-lda

A fast Cython implementation of Latent Dirichlet Allocation using a Collapsed Gibbs Sampler.

d-sne-pytorch icon d-sne-pytorch

A PyTorch port of the existing MXNet implementation for the 2019 CVPR paper "d-SNE: Domain Adaptation Using Stochastic Neighborhood Embedding."

data-template icon data-template

Template repo for making datasets we can include as pythonic dependencies of SCT.

joshuacwnewton icon joshuacwnewton

You found a secret! joshuacwnewton/joshuacwnewton is a ✨special ✨ repository that you can use to add a README.md to your GitHub profile.

listening-history icon listening-history

Storing my music listening history (and any related data manipulation efforts)

model_seg_sci icon model_seg_sci

Deep-learning based segmentation of the spinal cord and lesions in traumatic SCI

nibabel icon nibabel

Python package to access a cacophony of neuro-imaging file formats

onnx-to-tflite icon onnx-to-tflite

Converting the ONNX model representation to the TensorFlow Lite representation.

portalocker icon portalocker

An easy library for Python file locking. It works on Windows, Linux, BSD and Unix systems and can even perform distributed locking. Naturally it also supports the with statement.

pysct icon pysct

Python Bindings for the Spinal Cord Toolbox

shields icon shields

Concise, consistent, and legible badges in SVG and raster format

spinalcordtoolbox icon spinalcordtoolbox

Comprehensive and open-source library of analysis tools for MRI of the spinal cord.

swift-classification icon swift-classification

A sister repository to "swiftwatcher" for testing classification between images of chimney swifts and images of other bird species.

swiftwatcher icon swiftwatcher

An application for tracking the behaviour of migratory chimney swifts in video footage using computer vision

test-github-actions icon test-github-actions

A place to experiment with GitHub Actions without needing to open up PRs on main repositories

vid_to_hdf5 icon vid_to_hdf5

Small utility for extracting frames from a video file and storing them in an HDF5 container.

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