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jo's Projects

atlas icon atlas

ATLAS - Three commands to start analyzing your metagenome data

cele_mods icon cele_mods

Comparison of metabolic models of C. elegans

corda icon corda

An implementation of genome-scale model reconstruction using Cost Optimization Reaction Dependency Assessment by Schultz et. al

cyc2sbml icon cyc2sbml

Converting pathwaytools database to sbml

cz icon cz

Anki-Deck: Tschechisch Schritt für Schritt (Lida Hola)

driven icon driven

Data-Driven Constraint-based analysis

gapseq icon gapseq

Informed prediction and analysis of bacterial metabolic pathways and genome-scale networks

hoc icon hoc

history of christianity german subtitles

isme2020 icon isme2020

Zimmermann2020 - The functional repertoire contained within the native microbiota of the model nematode Caenorhabditis elegans

metacoder icon metacoder

Parsing, Manipulation, and Visualization of Metabarcoding/Taxonomic data

sclack icon sclack

The best CLI client for Slack, because everything is terrible!

seqtime icon seqtime

The seqtime R package provides functions to analyse sequencing data time series and to simulate community dynamics

sybil icon sybil

Fork of sybil — Efficient Constrained Based Modelling in R. Homepage: http://www.cs.hhu.de/en/research-groups/bioinformatics/software/sybil.html

sysbio-nb icon sysbio-nb

ipython notebooks related to systems biology

wormexp icon wormexp

Project organization, documentation and scripts for the update of WormExp database

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