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ai-for-healthcare-keras-tensorflow-2.0

Source Code for 'AI for Healthcare with Keras and Tensorflow 2.0' by Anshik Bansal

bloatectomy

A python package for removing duplicate text in clinical notes or other documents

clinical-notes-diagnosis-dl-nlp

clip

Contrastive Language-Image Pretraining

clip-1

cloob

cnep

CNEP (Contrastive Notes Events Pre-training), Contrastive Learning with Clinical Notes and Events Data Pre-training from MIMIC-III

dlbook_notation

LaTeX files for the Deep Learning book notation

embeddings

Code for AMIA CRI 2016 paper "Learning Low-Dimensional Representations of Medical Concepts"

explainable-automated-medical-coding

Implementation and demo of explainable coding of clinical notes with Hierarchical Label-wise Attention Networks (HLAN)

fiddle

FlexIble Data-Driven pipeLinE – a preprocessing pipeline that transforms structured EHR data into feature vectors to be used with ML algorithms. https://doi.org/10.1093/jamia/ocaa139

former

Simple transformer implementation from scratch in pytorch.

hedgehog

🦔 Bayesian networks in Python

hopfield-layers

Hopfield Networks is All You Need

huggingface-nlp-demo

jplasser

About me!

jplasser.github.io

Personal Github Page

llms-from-scratch

Implementing a ChatGPT-like LLM from scratch, step by step

logbert

log anomaly detection via BERT

medicationcategories

Quick script to parse out medications from discharge summaries in MIMIC format. Not that this approach uses minimal NLP, and can be vatly improved.

mimic-code

MIMIC Code Repository: Code shared by the research community for the MIMIC-III database

mimic-iii_icu_readmission_analysis

This is the source code for the paper 'Analysis and Prediction of Unplanned Intensive Care Unit Readmission'

mimic3-benchmarks

Python suite to construct benchmark machine learning datasets from the MIMIC-III clinical database.

mimic_extract

MIMIC-Extract:A Data Extraction, Preprocessing, and Representation Pipeline for MIMIC-III

open_clip

An open source implementation of CLIP.

openai-clip

Simple implementation of OpenAI CLIP model in PyTorch.

pet

This repository contains the code for "Exploiting Cloze Questions for Few-Shot Text Classification and Natural Language Inference"

practical-guide-to-applied-conformal-prediction

Practical Guide to Applied Conformal Prediction, published by Packt

python-cheatsheet

Comprehensive Python Cheatsheet

pytorch-book

Code included in the book, PyTorch Pocket Reference