jpreall Goto Github PK
Type: User
jpreall's Projects
clippings
Tool for annotating TSO-clipped reads from 10X Genomics scRNAseq data
ftps_2022
CSHL Plant Science Course, Single Cell Lectures, 2022
ftps_2023
CSHL Plant Sciences Course Single-Cell Analysis, 2023
halfsat
Calculate half-saturation point from 10X Genomics subsampling summary
palantir
Single cell trajectory detection
scanpy
Single-Cell Analysis in Python. Scales to >1M cells.
seqtech2019
CSHL 2019 Advanced Sequencing Technologies and Applications Course Materials
seqtech_2022
CSHL Advanced Sequencing Technologies Course, 2022. Single Cell Dry Lab
seqtech_2023
CSHL Advanced Sequencing Technologies Course, 2023
soupx
R package to quantify and remove cell free mRNAs from droplet based scRNA-seq data
velocyto-notebooks
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