jrcunning Goto Github PK

acerv-gwas

bsrte

Bahamas reciprocal transplant experiment with Acropora cervicornis

cbass_fl_acer

Data for: Census of heat tolerance among Florida’s threatened staghorn corals finds resilient individuals throughout existing nursery populations

cbass_kjs_nsu

CBASS runs on KJS' NSU nursery corals on CRII, Aug. 2020

cbass_methods

compbio-rnaseq

analyzing RNAseq data

coral

R package for dynamic bioenergetic modeling of coral-Symbiodinium symbioses

coral-analysis

Code repository for "A dynamic bioenergetic model for coral-Symbiodinium symbioses and coral bleaching as an alternate stable state"

crescynt-workshop

drto_acer

fish-coral

fl_hist_its2

fluconazole

hc_metrics

Haerther Center conservation research quarterly metrics

intro_fate

ipam2r

Imports data from imagining PAM fluorometer into R

kbayrecov2014

Data for: Patterns of bleaching and recovery of Montipora capitata in Kāneʻohe Bay, Hawaiʻi, USA

kbayrecov2015

labnotebook

My open lab notebook

labnotebooktools

mcav_shuffle

Data for: Thermotolerant coral symbionts modulate heat stress-responsive genes in their hosts

mcrad

mcradseq

RAD sequencing of bleaching-resistant vs. susceptible Montipora capitata corals

metacomm

mote1

mwk-wq

Water quality data analysis and reporting

ofav-genome

pdam-genome

pom-dredge

Analysis of dredging impacts to coral reefs at the Port of Miami

popgen

Scripts for CompBio-athon PopGen instructional sessions: SNP analyses, Population Differentiation analyses, Outlier analyses & GWAS, eQTL analyses