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Julian Trachsel's Projects

bash_fun icon bash_fun

bash functions for common sequence manipulations. Use with gnu parallel.

bb10-ijsem icon bb10-ijsem

Code for generating phylogenetic trees and figures associated with BB10's IJSEM paper

drep icon drep

Rapid comparison and dereplication of genomes

funfuns icon funfuns

A collection of functions I use for data analysis

ggscinames icon ggscinames

ggplot2 geoms for scientific names in figures (italics)

gifrop icon gifrop

Genomic Islands From Roary Pangenomes

hberg icon hberg

Salmonella enterica serovar Heidelberg

jej_nuc_bd icon jej_nuc_bd

BD Rhapsody multiplexed single nucleus sequencing

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