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alignmentseteditor

A reads alignment set editor

ampliconutils

Workflows for quality-control, clustering, and other processing of Amplicon data

annotation_ontology_api

arast_sdk

assemblysequenceapi

assemblyutil

Set of KBase functions for interacting with Assemblies and ContigSets using the KBase data_api

bbtools

biochem_modeling_api

biochemistryapi

biome_classification

Biome classification using Catboost model

buildtestgenome

cb_annotation_ontology_api

circulargenomeadvanced

Graphical maps of circular genomes that show sequence features, base composition plots, analysis results and sequence similarity plots.

cobrapybasedfba

Wrapper of COBRApy FBA functions in KBase replacing some functionality in the fba_tools module

coexpression

compoundsetutils

conditionsetutils

conditionutils

contigfilter

An example app that filters out contigs that are smaller than a minimum length from an assembly

coreservicesintegrationtests

datafileutil

datapaletteservice

differentialexpressionutils

Module to upload/download/export differential expression object

domainannotation

SDK port of KBase GeneFamilies service

editorapps

Repository for specifications for Narrative Editor Apps

ensemblemodeling

examplewdl

Example WDL app

expressionapi

To get ExpressionMatrix object from Expressionset object.

expressionutils

Functions for uploading and downloading KBase expression files.