Error in installation

[kchen-lab]

Error in installation

[yumingliutroy]

Dear authors,
I encountered the same problem that the package cannot be installed.
Thanks for your attention!

[Fang0828]

Hi Calogero,
I noticed you installed SCMarker under R/3.6. Did you try R/3.5 or other version less 3.6? SCMarker was packaged in R/3.5. We'll update SCMarker to R/3.6 ASAP.

[marvinquiet]

Dear authors,

I am trying to install the package but encountered the same problem as they did. I wonder if you could add a '}' on line 87 in HeatmapCluster.Rd file? It seems that a '}' is missing there.

Thank you for your attention!

[dfermin]

If you are running R on linux you can install the package by downloading it from source.

cd /tmp
git clone https://github.com/KChen-lab/SCMarker.git

Then in R type in this command:

library(devtools)
build("SCMarker")

This will produce the tarball you can then install in R with:

install.packages("SCMarker_2.0.tar.gz", repose=NULL, type="source")
library(SCMarker)

[HaniJieunKim]

Hi @Fang0828!

I am getting the same error as everyone. I have followed @dfermin's suggestion but get the following error when running the last two lines of code.

Warning in install.packages :
  package ‘SCMarker_2.0.tar.gz’ is not available for this version of R

My R version is 4.0.5. Any suggestions on how to install your package?

Thanks!

Best regards,

Hani

[HaniJieunKim]

FYI, I have tried to install on an older version of R (3.5.2), but still get the same error.

> install.packages("SCMarker_2.0.tar.gz",  type="source")
Warning in install.packages :
  package ‘SCMarker_2.0.tar.gz’ is not available (for R version 3.5.2)