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Ken's Projects

anansi icon anansi

Automated website security scanner

awesome-cv icon awesome-cv

Awesome CV is LaTeX template for your outstanding job application

bamtools icon bamtools

C++ API & command-line toolkit for working with BAM data

bcbio-nextgen icon bcbio-nextgen

Best-practice pipelines for fully automated high throughput sequencing analysis

bookdown icon bookdown

Authoring Books and Technical Documents with R Markdown

bowtie icon bowtie

An ultrafast memory-efficient short read aligner

bwa icon bwa

Burrow-Wheeler Aligner

chipster icon chipster

Chipster is a user-friendly analysis software for high-throughput data.

corgy icon corgy

An RNA manipulation library.

cromshell icon cromshell

shell script for interacting with cromwell servers

easybuild-framework icon easybuild-framework

EasyBuild is a software installation framework in Python that allows you to install software in a structured and robust way.

emacs-for-python icon emacs-for-python

Collection of emacs extensions specifically collected for python development, with workflow guidelines!

gatk4-data-processing icon gatk4-data-processing

Workflows for processing high-throughput sequencing data for variant discovery with GATK4 and related tools

sga icon sga

de novo sequence assembler using string graphs

sickle icon sickle

Windowed Adaptive Trimming for fastq files using quality

spacemacs icon spacemacs

A community-driven Emacs distribution - The best editor is neither Emacs nor Vim, it's Emacs *and* Vim!

tcgabiolinks icon tcgabiolinks

This is a read-only mirror of the Bioconductor SVN repository. Package Homepage: http://bioconductor.org/packages/devel/bioc/html/TCGAbiolinks.html Contributions: https://github.com/BioinformaticsFMRP/TCGAbiolinks. Bug Reports: https://support.bioconductor.org/p/new/post/?tag_val=TCGAbiolinks or https://github.com/BioinformaticsFMRP/TCGAbiolinks/issues.

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