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Controls for simlike about kevlar HOT 2 CLOSED

17tranap avatar 17tranap commented on September 8, 2024
Controls for simlike

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Comments (2)

standage avatar standage commented on September 8, 2024

Unfortunately, the instance of the model implemented by kevlar simlike is pretty specific to autosomal inheritance in diploid organisms. The model itself is generalizable, but I wouldn't expect this last step in the kevlar workflow to work well on plant data out-of-the-box. I'd be happy to advise on implementation and tuning, but wouldn't have much time myself to devote to it at the moment.

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17tranap avatar 17tranap commented on September 8, 2024

The plant I am working with is a diploid plant whose seeds were mutagenized, grown, and then mated back with the parent. I would be interested in the results of simlike, even if it is not tuned well for my use case, so I am wondering at the source of the error that I attached. Please let me know if you have any ideas and I will try to resolve the code myself. I'd be happy to contribute as a branch in the future.

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