kevyin Goto Github PK

akka-book-wyatt

Work through of Akka Concurrency

bcbb

Useful bioinformatics code, primarily in Python and R

bcbio-nextgen

Best-practice pipelines for fully automated high throughput sequencing analysis

btree

cs3171 deliverable 4. A BTree with bi-directional iterators.

cloudbiolinux

CloudBioLinux: configure virtual (or real) machines with tools for biological analyses

coocurrence-streams

Calculate coocurrence, implemented using itertools streams

cuda

Haskell FFI bindings to CUDA

cutadapt

Cutadapt removes adapter sequences from sequencing reads

dark_and_camouflaged_genes

dascrubber-wrapper

Wrapper script for easier read scrubbing with DASCRUBBER

drmaa-pbs

DRMAA PBS Java API, using command executions like qsub and qstat

fast-cpp-csv-parser

fast-cpp-csv-parser

flowcraft

A Nextflow pipeline assembler for genomics :whale::package:

gatk-protected

GATK Official Release Repository: contains the core MIT-licensed GATK framework, plus "protected" tools restricted to non-commercial use only

groopm

Metagenomic binning suite

hfx

Accelerated cross-correlation based identification of protein sequences

home-settings

linux settings in home directory

interop

C++ Library to parse Illumina InterOp files

intervaltree

a minimal C++ interval tree implementation

laundry_app

multigpu

Haskell implementation of NVIDIA's simpleMultiGPU example using the cuda package

nbnfinder

Helps you look for properties on the market with NBN

ngsane

Analysis Framework for Biological Data from Hight Throughput Experiements

pbs-java-api

PBS Java API

pipelines-api-examples

Examples for the Google Genomics Pipelines API.

quickhist

quickly plot a histogram on the CLI

safesemaphore

SafeSemaphore is a Haskell library replacing non-exception safe libraries like QSem, QSemN, SampleVar

sitta

So It's Time To Analyse

six-degrees

cs3171 deliverable 1. Implementation of the six degrees of Kevin Bacon game.

small-query-database

cs3171 deliverable 3. Small query-able database using templates.