Kiran Franklin's Projects
Breast Cancer Survival Prediction
The Leek group guide to data sharing
This deals with EDA and building various ML models using sklearn: KNeighborsRegressor DecisionTreeRegressor RandomForestRegressor,AdaBoostRegressor LinearRegression, Ridge,Lasso, etc and HP using randomCV and deploy the same in localhost via flask
Its is an End-to-End Random forest implementation includes data preprocessing [ cleaning, feature selection and engineering],EDA, hyperparameter tuning, Model interpretation with uncertainty and prediction intervals and plotting the feature importance .
Plotting Assignment 1 for Exploratory Data Analysis
Exploring QSAR: From Data Collection to Structure-Activity Relationship Analysis
Mechanisms of Action (MoA) Prediction
It is POC project, using Nextflow to run ML pipeline
A tool for evaluating the predictive performance on activity cliff compounds of machine learning models
MolPro is a comprehensive python package for small molecule generation using protein active site or/and similar molecules using 3D information of molecules with in-silico validation of molecules by docking , pharmacophore hypothesis. Also off target prediction based on the binding site similarities.
This repo is tutorial for exploring various algorithms for Multi-output prediction in ML and DL using a regressor data and understanding them how mathematically they work.
Introduction to Bioinformatics workflows with Nextflow
OpenCV mini projects
PyQT based GUI to classify the plant disease classification. Model is trained on Kaggle data.
My resume
Simple RNA Seq upstream pipeline buidling using nextflow and downstream analysis using DESeq2
Simple RNA-seq upstreaming Pipeline using Nextflow