kisun Goto Github PK
Name: Kisun Pokharel
Type: User
Company: @lukefi
Bio: Research Scientist, Bioinformatician @lukefi
Twitter: kisunpokharel
Location: Finland
Name: Kisun Pokharel
Type: User
Company: @lukefi
Bio: Research Scientist, Bioinformatician @lukefi
Twitter: kisunpokharel
Location: Finland
Public material for CS109
Github Pages template for academic personal websites, forked from mmistakes/minimal-mistakes
Materials for Analyzing Next-Generation Sequencing (ANGUS) course.
Annocript is a pipeline for the annotation of de-novo generated transcriptomes. It executes BLAST analysis with UniProt, NCBI Conserved Domain Database and Nucleotide divisions, Gene Ontology, UniPathways and the Enzyme Commission. It gives information about the longest ORF (using DNA2PEP) and non-coding potential of the sequences (using Portrait). A final heuristic makes Annocript able to identify putative long non-coding RNAs among your transcripts.
Personal website of Alison Presmanes Hill
A powerful toolset for genome arithmetic.
Python scripts for analysis of next-gen sequencing data.
Course homepages for some of the courses given at SciLifeLab
The Leek group guide to data sharing
Enhancement proposals for the Jupyter Ecosystem
IODS Final project
My personal learning diary for this course
:globe_with_meridians: Jekyll is a blog-aware, static site generator in Ruby
trying some web stuffs
STAR based ENCODE Long RNA-Seq processing pipeline
Fork of https://code.google.com/p/ngs-analysis
some notes and summary of research articles
Useful bash one-liners for bioinformatics.
My PhD project and (almost) everything related to it.
Dynamic Documents for R
RNA sequencing analysis pipeline using STAR or HISAT2, with gene counts and quality control
Informatics for RNA-seq: A web resource for analysis on the cloud. Educational tutorials and working pipelines for RNA-seq analysis including an introduction to: cloud computing, critical file formats, reference genomes, gene annotation, expression, differential expression, alternative splicing, data visualization, and interpretation.
Source code of the RNAseqPipeline of the Microarray and Sequencing platform - IGBMC - Strasbourg
The Simple Fool's Guide to population genomics using RNA-Seq
:snake: Snakefiles for common RNA-seq data analysis workflows.
A declarative, efficient, and flexible JavaScript library for building user interfaces.
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
An Open Source Machine Learning Framework for Everyone
The Web framework for perfectionists with deadlines.
A PHP framework for web artisans
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
Some thing interesting about web. New door for the world.
A server is a program made to process requests and deliver data to clients.
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
Some thing interesting about visualization, use data art
Some thing interesting about game, make everyone happy.
We are working to build community through open source technology. NB: members must have two-factor auth.
Open source projects and samples from Microsoft.
Google ❤️ Open Source for everyone.
Alibaba Open Source for everyone
Data-Driven Documents codes.
China tencent open source team.