kjsanger Goto Github PK
Name: Keith James
Type: User
Location: UK
Name: Keith James
Type: User
Location: UK
A set of programs to manipulate SAM/BAM/CRAM files, using HTSLIB
iRODS client programs and API
JavaScript visualisation for bamcheck file format
GitHub Action providing a custom Docker container in which to build iRODS clients
CI Test
Singularity and Docker material
Scientific workflow engine designed for simplicity & scalability. Trivially transition between one off use cases to massive scale production environments
An extension to baton providing a Go API for iRODS (Integrated Rule-Oriented Data System)
Cross-platform file system notifications for Go.
Explore the contents of Illumina's binary Genotype Call files
Components of the WTSI genotype analysis pipeline.
A set of utilities to handle individual-level genotype data files
Go iRODS Client
C library for high-throughput sequencing data formats
A genotype calling algorithm for the Illumina BeadArray platform
Middleware for your critical data.
Fork of DICE irods-legacy
A shim API to provide library-independent logging statements for Go projects
logshim-zerolog is a backend using Zerolog for https://github.com/kjsanger/logshim
Protobuff and gRPC specifications for the MinKNOW LIMS Interface
Perl DBIx binding to a warehouse housing data from multiple LIM systems
A Nextflow pipeline for running the ARTIC network's fieldbioinformatics tools (https://github.com/artic-network/fieldbioinformatics), with a focus on ncov2019 - adapted to run at the Wellcome Sanger Institute
A DSL for data-driven computational pipelines
Applications for the management of data and metadata in iRODS
Synchronise iRODS metadata with upstream LIMS
NPG Conda recipes and tools
Tools for managing HTS (BAM and CRAM) format files in iRODS.
A declarative, efficient, and flexible JavaScript library for building user interfaces.
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
An Open Source Machine Learning Framework for Everyone
The Web framework for perfectionists with deadlines.
A PHP framework for web artisans
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
Some thing interesting about web. New door for the world.
A server is a program made to process requests and deliver data to clients.
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
Some thing interesting about visualization, use data art
Some thing interesting about game, make everyone happy.
We are working to build community through open source technology. NB: members must have two-factor auth.
Open source projects and samples from Microsoft.
Google ❤️ Open Source for everyone.
Alibaba Open Source for everyone
Data-Driven Documents codes.
China tencent open source team.