kushalkolar Goto Github PK
Name: Kushal Kolar
Type: User
Company: Flatiron CCN & NYU
Bio: Neuroscience, image analysis, and scientific visualization stuff :parrot: :rocket: :milky_way:
Twitter: kushalkolar
Kushal Kolar's Projects
3deecelltracker
A python algorithm for tracking cells in 3D time lapse images.
acquisitioninterfaces
Just some helper classes for video acquisition through a uniform interface
admin-requests
applinalgcode
Code for the book "Linear algebra, signal processing, and wavelets. A unified approach"
auto-cnmf
An attempt at automated CNMF using gradient descent
awesomeimager
Application for volumetric imaging using an Electrically tunable lens (ETL)
awesomeviewer
Just a simple fast viewer for multi page tiff files
band-artifact-removal
Algorithm for removal of noise bands from calcium imaging data
behavenet
Toolbox for analyzing behavioral videos and neural activity
behaviouranalysis
Software for the analysis of the behaviour of Ciona Intestinalis
blobs_genetic_algorithm
Exercise in genetic algorithms/ evolution of objects, implemented in python.
bokeh_lif
Bokeh lif explorer
caiman-core
Computational toolbox for large scale Calcium Imaging Analysis, including movie handling, motion correction, source extraction, spike deconvolution and result visualization.
caiman-napari-prototype
prototype caiman plugin for napari
ccn-template
Template repository for CCN software projects
chen_institute_datasai_for_neuroscience
composition_sugar
Syntactic sugar for function composition in Python
deepethogram
deg-installation-instructions
dispatcher
Small tool for dispatching a function to another process
educational
emd-explained
An intuitive understanding of the Earth Mover's Distance metric
emd_illustrate
engcomp4_landlinear
Using computational thinking to get deep insights on the foundations of linear algebra
engcomp6_deeplearning
A step-by-step introduction to deep learning (a.k.a. neural network) models for scientists and engineers.
escape-from-automanual-testing
A three-hour tutorial on property-based testing with https://hypothesis.works
euroscipy
Astronomical image analysis tutorial for EuroScipy 2019
euroscipy2019-numba
EuroSciPy 2019 Numba Tutorial
gans-from-theory-to-production
Material for the tutorial: "Deep Diving into GANs: from theory to production"
gpu-passthrough-tutorial
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