lafita Goto Github PK

arduino

:robot: Scripts for Arduino UNO

awesome-adam

Awesome list of applications that extend Big Data Genomics ADAM. CC0 licensed.

bioconda-recipes

Conda recipes for the bioconda channel.

biojava

BioJava is an open-source project dedicated to providing a Java framework for processing biological data.

biojava-tutorial

A tutorial for BioJava

biojava.github.io

The code for the new BioJava homepage.

biopython

Official git repository for Biopython (converted from CVS)

btm2018-latex

:book::books:Materials for the LaTeX lecture of the BTM module during the EMBL Predoc Course 2018

build-pfam-course

:books::family: Materials and example for the tutorial to build protein families

edmcr

Euclidean distance (^2) matrix completion

eppic

Evolutionary protein-protein interface classifier

inmembrane

lafita.github.io

Personal website - CV style

logo

A repository to host the competition for a new BioJava logo

mmtf-fragment-search

Search similar fragments across the PDB using MMTF

mmtf-hackathon-2018

Hackathon projects repository for MMTF Workshop 2018

motif-search

Search protein structural motifs in the PDB.

obf-docs

Official documents of the Open Bioinformatics Foundation

protein-edm-demo

:1234::twisted_rightwards_arrows: Protein structure modelling using Euclidean distance matrices (EDMs)

qs-align

:arrow_lower_right::arrow_upper_right::leftwards_arrow_with_hook: Scalable protein quaternary structure alignment algorithm

repeats-webinar

:books::computer:Materials for the EMBL-EBI webinar on protein repeat detection and evolution

research-software

Issue tracker for the software installation on the computing cluster

rgn

Recurrent Geometric Networks for end-to-end differentiable learning of protein structure

science-graphics

:bar_chart::chart_with_upwards_trend:Collection of R scripts to generate common science figures directly from the Linux command line

slurm

Cookiecutter for snakemake slurm profile

symmetry

Detect, analyze, and visualize protein symmetry

symmetry-benchmark

Benchmarks for testing the symmetry package

tadoss

:open_hands: TADOSS: TAndem DOmain Swap Stability predictor

treks-hpc

High performance version of T-REKS for tandem repeat detection