lauradmartens Goto Github PK
Name: Laura Martens
Type: User
Company: Helmholtz Munich/ Technical University Munich
Bio: Graduate student at TU Munich and Helmholtz Zentrum Munich.
Twitter: lauradmartens
Location: Munich
Laura Martens's Projects
gillespy
Python + Numba = readable and efficient Gillespie algorithm
kipoiseq
Standard set of data-loaders for training and making predictions for DNA sequence-based models.
lauradmartens.github.io
models
Model zoo for genomics
muon
muon is a multimodal omics Python framework
numpy
The fundamental package for scientific computing with Python.
peft
🤗 PEFT: State-of-the-art Parameter-Efficient Fine-Tuning.
pycistopic
pycisTopic is a Python module to simultaneously identify cell states and cis-regulatory topics from single cell epigenomics data.
scvi-tools
Deep probabilistic analysis of single-cell omics data
scvi-tutorials
Notebooks used in scvi-tools tutorials
seml
SEML: Slurm Experiment Management Library
snapatac2
Single-cell epigenomics analysis tools
subset-bam
website
http://kipoi.org
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