leonardj09 Goto Github PK
Name: Jacob Leonard
Type: User
Bio: Early career Data Scientist interested in exploring all methods of data interpretation, analysis and visualization across multiple disciplines
Location: Mexico City, Mexico
Jacob Leonard's Projects
bio-playground
miscellaneous scripts for bioinformatics/genomics that dont merit their own repo.
biscuit
a little tool for bisulfite data
bwa-meth
align BS-Seq reads and extract methylation without intermediate temp files
coursework
summer school coursework
crystal
find clusters and model correlated data from DNA methylation and other genomic sources.
datasciencecoursera
datasharing
The Leek group guide to data sharing
deconstructsigs
deconstructSigs
dynamic-modeling
gdc-client
GDC Data Transfer Tool
googlepython
Googles python coursework
hadoop-docker
Hadoop docker image
linkedin
Linkedin Scraper using Selenium Web Driver, Firefox 45, Ubuntu and Scrapy
locu-python
A Python wrapper for Locu's API
luigi
Luigi is a Python module that helps you build complex pipelines of batch jobs. It handles dependency resolution, workflow management, visualization etc. It also comes with Hadoop support built in.
matlab-programming
meetup_roadshow
Demo Material for 2017 RStudio Meetup Roadshow
mitalgorithms
mk-gatk
models
Models built with TensorFlow
nextflow
A DSL for data-driven computational pipelines
numerical-methods
plan-wealth-web-crawler
processing.py
Write Processing sketches in Python
theory-and-computational-methods-for-optimization
trinityrnaseq
Trinity RNA-Seq de novo transcriptome assembly
vcfanno
annotate a VCF with other VCFs/BEDs/tabixed files
w3sql-course
wgbs
Packages for the WGBS Pipeline, localized and basespace nativeApp
wgbs2
Whole Genome Bisulfite Analysis tool using biscuit->metilene
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