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Hongmei LI-BYARLAY's Projects

bismark icon bismark

A tool to map bisulfite converted sequence reads and determine cytosine methylation states

courses icon courses

Course materials for the Data Science Specialization: https://www.coursera.org/specialization/jhudatascience/1

iapv icon iapv

Codes for IAPV transcriptomics and methylomics

methylpy icon methylpy

methylpy is a whole genome bisulfite sequencing analysis pipeline. It is developed by Mattew D. Schultz.

rnaseq_tutorial icon rnaseq_tutorial

Informatics for RNA-seq: A web resource for analysis on the cloud. Educational tutorials and working pipelines for RNA-seq analysis including an introduction to: cloud computing, critical file formats, reference genomes, gene annotation, expression, differential expression, alternative splicing, data visualization, and interpretation.

scythe icon scythe

A 3'-end adapter contaminant trimmer

swirl_courses icon swirl_courses

:mortar_board: A collection of interactive courses for the swirl R package.

tophat icon tophat

Spliced read mapper for RNA-Seq

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