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apvalidation

The apvalidation python package. Installed via pip (check READme)

article-pipeline-docs

A public repository to host a documentation page for the article_pipeline

green_tea_ms

Scripts for mass spectrometry peak alignment for green tea metabolomics project

html-parser

html parser extracts html tables from Journal of Natural Products. Gathering NMR table types/number of compounds, parsing the rows/columns and separating multiple data types from a single cell.

isoanalyst

IsoAnalyst - Analysis of biosynthetically linked stable isotope labeling experiments.

lab_database_api

RESTful API for lab database

madbyte

Metabolomics And Dereplication By Two-dimensional Experiments - MADByTE NMR Metabolomics Platform

ms2analyte_datavisualization

Data Visualization GUI for MS2Analyte

ms_codeutils

A collection of scripts for Python driven MS

multiplexms

MultiplexMS - Companion tool

multiplexms_documentation

MultiplexMS GitHub documentation

mvpa

Multivariate Pattern Analysis (MVPA) R package

mvpashiny

Multivariate Pattern Analysis (mvpa) R shiny package

mvpashiny_documentation

npa-named-entity-recognition-scripts

Repo for NER scripts for NPA Ingestion Database enrichment

npanalyst

Tool-chain for relating metabolite MS data with bio-activity data. Hosted at www.npanalyst.org

npmrd_curator

Backend + Frontend for NP-MRD curation web tools

relationext

The package for the relation_extraction repo code.

sample_git_project

A simple sample git project

selenium_source

The source code for selenium tests to be run on the deposition site.

snapms

core code for the SNAP MS platform for predicting identities of natural products from MS data