liuweiathust Goto Github PK

awesome-public-datasets

A topic-centric list of HQ open datasets.

awesome-single-cell

Community-curated list of software packages and data resources for single-cell, including RNA-seq, ATAC-seq, etc.

biotools

liuwei's bioinformatical analysis tools

commondatamodel

Definition and DDLs for the OMOP Common Data Model (CDM)

covmutit_r

cwl_taste

try to use CWL (common workflow language) to build workflows

deeplearning-biology

A list of deep learning implementations in biology

electron-fluent-ui

Start developing an electron application with TypeScript and Fluent UI React components.

fastapi-mongo-template

fastapi_template

A template for FastAPI project

gh_pat

hipaa-compliance-developers-guide

A developers guide to HIPAA compliance and application development.

jupyter_conda

use Jupyter on HPC server

lihang-code

《统计学习方法》的代码实现

lihang_algorithms

用python和sklearn两种方法实现李航《统计学习方法》中的算法

liuweiathust.github.io

mc3

MC3 somatic mutation calling workflow

multimodalmappingpda-scrnaseq

Raw data and analysis of scRNA Seq experiments for the paper Multimodal Mapping of the Immune Landscape in Human Pancreatic Cancer. This repository includes the raw data and core R script that will replicate Figures 1E, 1G, 1H, and Supplementary Figure 1D. To replicate the analysis, place the R script in R Studio and load the data into the Global Environment. The R script will then run and generate the four figures found in the manuscript. Veerin Sirihorachai July 31, 2019

ribo-seq

Pipeline and scripts for the comparative analysis of ribosome profiling and matched RNA sequencing data between organs and across species.

ribopipe

RNA-Seq and Ribo-Seq (ribosome profiling) data workup pipelines

robby-chatbot

AI chatbot 🤖 for chat with CSV, PDF, TXT files 📄 and YTB videos 🎥 | using Langchain🦜 | OpenAI | Streamlit ⚡

screenshot-to-code

Drop in a screenshot and convert it to clean HTML/Tailwind/JS code