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Xingqian Li's Projects

ampliconarchitect icon ampliconarchitect

AmpliconArchitect (AA) is a tool to identify one or more connected genomic regions which have simultaneous copy number amplification and elucidates the architecture of the amplicon. In the current version, AA takes as input next generation sequencing reads (paired-end Illumina reads)

babyai icon babyai

BabyAI platform. A testbed for training agents to understand and execute natural language commands.

blog icon blog

个人技术博客,博文写在 Issues 里。

carbon-lang icon carbon-lang

Carbon Language's main repository: documents, design, implementation, and related tools. (NOTE: Carbon Language is experimental; see README)

ccsmeth icon ccsmeth

Detecting DNA methylation from PacBio CCS reads

cfdna icon cfdna

Analysis of epigenetic signals captured by fragmentation patterns of cell-free DNA

codon icon codon

A high-performance, zero-overhead, extensible Python compiler using LLVM

cookiecutter-data-science icon cookiecutter-data-science

A logical, reasonably standardized, but flexible project structure for doing and sharing data science work.

debreak icon debreak

Structural variant caller for real-time long-read sequencing data

deepsomatic icon deepsomatic

DeepSomatic is an analysis pipeline that uses a deep neural network to call somatic variants from tumor-normal sequencing data.

editor.md icon editor.md

The open source embeddable online markdown editor (component).

face_classification icon face_classification

Real-time face detection and emotion/gender classification using fer2013/imdb datasets with a keras CNN model and openCV.

genmk icon genmk

Quickly generate makefiles for bioinformatics pipeline analysis or other data analysis projects

gpt_academic icon gpt_academic

为GPT/GLM等LLM大语言模型提供实用化交互接口,特别优化论文阅读/润色/写作体验,模块化设计,支持自定义快捷按钮&函数插件,支持Python和C++等项目剖析&自译解功能,PDF/LaTex论文翻译&总结功能,支持并行问询多种LLM模型,支持chatglm3等本地模型。接入通义千问, deepseekcoder, 讯飞星火, 文心一言, llama2, rwkv, claude2, moss等。

insurveyor icon insurveyor

An insertion caller for Illumina paired-end WGS data.

manta icon manta

Structural variant and indel caller for mapped sequencing data

opencat icon opencat

A programmable and highly maneuverable robotic cat for STEM education and AI-enhanced services.

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