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followers: 7.0 following: 6.0 repos: 11.0 gists: 0.0

Name: Zhaozhi Li

Type: User

Company: Massachusetts General Hospital

Bio: : -) I love biology, programming, data science and machine learning

Location: Cambridge MA

Hi there, I'm Zhaozhi Li

I am a bioinformatics analyst at Massachusetts General Hospital, Department of Neurology, MassGeneral Institute for Neurodegenerative Disease Data Science Lab (MINDDS).

Glad to see you here!

🌱 Talking about Personal Stuffs:

💻 Education: Sichuan University(BS); Northeastern University(MS); Cornell University(Ph.D.)
📫 Contact: [email protected]
👾 I'm currently working with high-through put biological data
🚀 I'm currently learning deep learning
💬 I was born in China and now living in Boston.
❤️ I love programming, suspense movies, and drawing.

🛠 Languages and Tools:

📝 Latest Publication:

Serrano-Pozo, A., Li, Z., Noori, A., Nguyen, H. N., Mezlini, A., Li, L., ... & Das, S. (2021). Effect of APOE alleles on the glial transcriptome in normal aging and Alzheimer’s disease. Nature Aging, 1(10), 919-931.

📈 My GitHub Stats:

Zhaozhi Li's Projects

aiml-wg

Repository with scripts from IARC's Machine Learning / Artificial Intelligence working group

brc_mh_bioinformatics

Collection of pipelines, workflows and scripts for processing SNP and gene expression arrays and NGS data

dge_workshop

digitaldlsorter

A pipeline to generate a Deep Nerual Network cell type deconvolution model for bulk RNASeq samples from single cell experiment data

getbrandnames

Take a drug list and get their brand names

inext

R package for interpolation and extrapolation

lizhaozhi

ml_notebooks

A repository for public Machine Learning notebooks I have created

scdha

A tool for single-cell data analysis.

scrna-seq

single-cell-multi-omics-profiling-of-human-gliomas

Code for Chaligne, Gaiti, Silverbush, Schiffman et al. paper “Epigenetic encoding, heritability and plasticity of glioma transcriptional cell states”

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