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abcluster

actinn

annotate_v

Antibody Annotation - Annotate VH and VL sequences (FR and CDR) in Python

cancer-proteomics-compendium-n2002

We assembled a compendium dataset of mass-spectrometry-based proteomics data of 2002 primary tumors from 14 cancer types and 17 studies

data-scientist-path

depmap_omics

What you need to process the Quarterly DepMap-Omics releases from Terra

digitalcellsorter

Digital Cell Sorter (DCS): single cell RNA-seq analysis toolkit. Documentation:

fastintegration

FastIntegrate integrates thousands of scRNA-seq datasets and outputs batch-corrected values for downstream analysis

jobfunclassifier

ncbi_blast_cdh

pancaf

python_2weekssprint

Mastering Python from basics to an advanced level within two weeks challenge

react-learning

For learning React repository

sc-type

sccatch

Automatic Annotation on Cell Types of Clusters from Single-Cell RNA Sequencing Data

scina

SCINA: A Semi-Supervised Subtyping Algorithm of Single Cells and Bulk Samples

scmrma

scrnaseq_benchmark

Bench-marking classification tools for scRNA-seq data

shilts-et-al-2022-immunoreceptors

Supporting data files and code for the publication by Shilts et al.

singlecellnet

SingleCellNet: classify single cells across species and platforms

singler

SingleR: Single-cell RNA-seq cell types Recognition (legacy version)

tisch

Tumor Immune Single-cell Hub