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Zhijian Li's Projects

awesome-topic-models icon awesome-topic-models

✨ Awesome - A curated list of amazing Topic Models (implementations, libraries, and resources)

chromap icon chromap

Fast alignment and preprocessing of chromatin profiles

chrombpnet icon chrombpnet

Bias factorized, base-resolution deep learning models of chromatin accessibility (chromBPNet)

dictys icon dictys

Context specific and dynamic gene regulatory network reconstruction and analysis

dotfiles icon dotfiles

Personal OS and Unix tool configuration

mast icon mast

Tools and methods for analysis of single cell assay data in R

metaseq icon metaseq

Framework for integrated analysis and plotting of ChIP/RIP/RNA/*-seq data

metbrewer icon metbrewer

Color palette package in R inspired by works at the Metropolitan Museum of Art in New York

mmvae icon mmvae

Multimodal Mixture-of-Experts VAE

muon icon muon

muon is a multimodal omics Python framework

panda icon panda

The PANDA challenge: Prostate cANcer graDe Assessment using the Gleason grading system

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