ReScience

[manubot]

ReScience

[vsmalladi]

Looks like an excellent use case.

[dhimmel]

@rougier (lead contributor of ReScience/ReScience): check out the manubot project. It's a method for manuscript publishing via GitHub using continuous integration. You can see it in action at https://greenelab.github.io/scihub-manuscript/ and https://greenelab.github.io/deep-review/.

While the project is still under heavy development, you may be interested in using it in the future for ReScience. If so, your contribution helping build this system would be much appreciated!

[rougier]

That's fantastic ! This is precisely the kind of automation we were looking for. Currently, we (manually) produce a PDF via pandoc but we were also interested in producing the HTML (and xml as well if possible). Do you have some documentation on your project ? (I did not yet dig into it).

[dhimmel]

Do you have some documentation on your project ? (I did not yet dig into it).

The documentation is not great right now (work in progress), but is spread between:

• https://github.com/greenelab/manubot-rootstock/tree/master/references
• https://github.com/greenelab/manubot-rootstock/blob/master/CONTRIBUTING.md#markdown
• actual content markdown files like https://github.com/greenelab/manubot-rootstock/blob/master/content/03.figures.md

[agitter]

@rougier We used an early version of this build system for a review article, and the methods section there also provides a nice introduction to this project.