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Hello, I'm Marina

šŸ’¬ About Me:

  • šŸ”­ I'm currently working on building a Neural Network (NN) for predicting transcription factor binding sites as part of my thesis project.
  • šŸŽ“ I am completing my master's degree in Data Science, focusing on Machine Learning and its applications in bioinformatics.
  • šŸ¤ Iā€™m looking to collaborate on Data Science and Machine Learning projects, particularly those related to bioinformatics or predictive modeling.

šŸ“– Theory:

  • šŸ”¢ Linear Algebra
  • āˆ« Calculus
  • šŸ”§ Mathematical Optimization
  • šŸ“Š Probability and Statistics
  • šŸŽÆ Supervised Learning
  • šŸŒŒ Unsupervised Learning
  • šŸ„½ Computer vision
  • āš›ļø Quantum Physics
  • šŸ–„ļø Computational Physics
  • š›¾ Dirac Algebra

šŸ’» Tech Stack:

Python R NumPy scikit-learn LINUX ! Git Pandas PyTorch Keras Matplotlib Plotly !Shell Script LaTeX


šŸ“ˆ GitHub Stats:

GitHub Streak

Top Langs

Contact me šŸ“¬

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Marina Thalassini Filippidou's Projects

deeppocket icon deeppocket

Ligand Binding Site detection using Deep Learning

nested-cv icon nested-cv

Use the nested cross validation method in order to fine tune and test the perfomance of 5 machine learning algorithms, namely Sup- port Vector Machines, Linear Regression, Gaussian Naive Bayes and Linear Discriminant Analysis, on the Hepatitis C dataset

salinas-hsi-clustering icon salinas-hsi-clustering

The aim of this project is to implement and evaluate the performance of CFO and Hierarchical Clustering algorithms in the task of finding homogeneous regions in the Salinas HSI

scrna-seq-data-analysis icon scrna-seq-data-analysis

Utilization of dimensionality reduction and GMM clustering for the analysis of single cell RNA data

strelka icon strelka

Strelka2 germline and somatic small variant caller

tfbs-nn icon tfbs-nn

Constructing a pipeline for the creation of a tfbs dataset and the training of a NN

transfer-learning-vision icon transfer-learning-vision

Study on the performance of pre-trained models (VGG16, EfficientNetb0, ResNet50, ViT16) with weight fine tuning, as well as classical ML algorithms (Naive Bayes, Logistic Regression, Random Forest) on a dataset of 6.806 fungi microscopy Images utilizing Pytorch.

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