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active_commutator

arf

advanced recording format for physiology and behavior

arfformat

Arf file recording plugin for the Open-Ephys GUI

arfview

Visualization for data in the arf format.

bark

A timeseries data format

birdwerdz

budgie-sleep-paper-2020

Code used to generate analyses and figures for the 2020 paper Budgerigars have complex sleep structure similar to that of mammals (Canavan & Margoliash, PLoS Biology).

dlab

a grab bag of python functions for neural and audio signal processing

gui

Software for electrophysiology data acquisition

installation

This repository includes instructions for installation of lab programs: Intan, open-ephys, jack, jill, arf, yass, panoptisong and others with bash script or manually by following documentation.

jill

realtime electrophysiology, behavioral, and acoustic recording system

jill-in-a-box

Audio filtering for the Intan EVAL board ADC inputs

lbl

A python library for reading/writing and manipulating lbl files

mergevideos

MergeVideos to a single file

olive-press

Copies data in arf file to new file with no chunking

open-ephys-install-instructions

plugin-gui

Open Ephys GUI with plugin architecture

resin

A spectral analysis and feature extraction library similar to Sound Analysis Pro

rhd2arf

converts files created by Intan rhd2000 data aquisition software to arf

spikesorting_klusta_phy

Instructions and scripts for spike sorting with klusta and phy