Mat Beale's Projects
2021 Analysis of Global Treponema pallidum subspecies pallidum genomic diversity, distribution and lineage dynamics.
Scripts and Source data from 2019 Global Syphilis Phylogenomics and Macrolide resistance project
Raw data and code from Lassalle, Beale, et al "Whole genome sequencing of Herpes Simplex Virus 1 directly from cerebrospinal fluid reveals selective constraints in neurotropic viruses"
Novel scripts for analysis of Treponema pallidum genomes from Lihir, Papua New Guinea (Beale 2020)
Genomic and epidemiological analysis of Treponema pallidum genomes from UK (English) patients, 2012-2018.