matsengrp Goto Github PK
Name: Matsen Group
Type: Organization
Location: Fred Hutchinson Cancer Research Center, Seattle, WA
Name: Matsen Group
Type: Organization
Location: Fred Hutchinson Cancer Research Center, Seattle, WA
Adaptive LASSO for phylogenetics
A simple UCLUST-like clustering algorithm for pre-aligned sequences with built in recentering
Simulating virus evolution and epidemiology
Web app for visualizing pathogen evolution
general purpose library for evaluating the likelihood of sequence evolution on trees
Bayesian analysis of contingency tables as the ratio of two binomially distributed random variables
A biobox (http://bioboxes.org/) for Mixcr (https://github.com/milaboratory/mixcr)
This repository contains the partis project (https://github.com/psathyrella/partis) packaged into a biobox (http://bioboxes.org/).
Bio++ Core Library
Bio++ Phylogenetic Library
Bio++ Sequence Library
Bio++ Program Suite
Clonal family tree
For a Docker image containing conda and the BEAGLE phylogenetic likelihood library
Ricci-Ollivier curvature of SPR and related graphs.
a repository for the analysis of C9 and C19 dms data
A graph neural network tailored to directed acyclic graphs that outperforms conventional GNNs by leveraging the partial order as strong inductive bias besides other suitable architectural features.
Analyze deep mutational scanning of barcoded variants.
A standalone package for using deep mutational scanning data to predict the phenotypes of untested sequences from a multiple-sequence alignment.
Ancestral lineage reconstruction using BEAST or RevBayes
Curating the GB1 data from Olson et al
A declarative, efficient, and flexible JavaScript library for building user interfaces.
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
An Open Source Machine Learning Framework for Everyone
The Web framework for perfectionists with deadlines.
A PHP framework for web artisans
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
Some thing interesting about web. New door for the world.
A server is a program made to process requests and deliver data to clients.
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
Some thing interesting about visualization, use data art
Some thing interesting about game, make everyone happy.
We are working to build community through open source technology. NB: members must have two-factor auth.
Open source projects and samples from Microsoft.
Google ❤️ Open Source for everyone.
Alibaba Open Source for everyone
Data-Driven Documents codes.
China tencent open source team.