matthewmoscou Goto Github PK

avrrmo1

Identification of AvrRmo1

canthatch

Analyses, data, and scripts to identifying the wheat stem rust suppressor gene in wheat cv. Canthatch

emo

Genome sequencing and annotation of Ecdeiocolea monostachya

exo70

Analysis of the Exo70 gene family and NLR-Exo70

extract_promoters

Bash script for promoter sequences extraction

fat-cat

Fast Approximate Tree Classification

matthewmoscou.github.io

nlr-id_motif

Identification of protein motifs associated with NLRs harboring integrated domains

nlrclassify

Classification of NLRs based on an existing phylogenetic tree

qkbusco

A set of scripts that merge BUSCO orthologous genes for phylogenetic analysis.

qkcartographer

A set of scripts for processing QTL Cartographer output.

qkdomain

A set of scripts that can be used for domain analysis.

qkgenome

A set of scripts for converting genomes based on resequencing information.

qkkat

A suite tools that use output from KAT for gene identification

qkmicroscopy

Python scripts used for the analysis of microscopy data

qkphylogeny

A set of scripts for phylogenetic tree assessment and editing.

qkutilities

A set of scripts for parsing bioinformatic data.

tslsummerschool2017

A tutorial on genetics and visualization with ggplot2