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acidbio

alignmentprocessor

Prepares CDS fasta Alignments for use with several programs

atac_dnase_pipelines

ATAC-seq and DNase-seq processing pipeline

awesome-bioinformatics

A curated list of awesome Bioinformatics libraries and software.

batmon-ha

Add-on for Home Assistant to connect JK, JBD and Daly BMS via Bluetooth

bioc-refcard

Bioconductor quick reference card / cheat sheet

bioconda-recipes

Conda recipes for the bioconda channel.

biopython

Official git repository for Biopython (converted from CVS)

bsseq

Devel repository for bsseq

cellranger

10x Genomics Single Cell 3' Gene Expression and VDJ Assembly

cnvkit

Copy number variant detection from targeted DNA sequencing

complete-striped-smith-waterman-library

crispresso

Software pipeline for the analysis of CRISPR-Cas9 genome editing outcomes from sequencing data

cufflinks

docker-unifi

dotfiles

fastqp

Simple FASTQ quality assessment using Python

flask-bootstrapped-template

A template for building visualisation and analysis apps of RNA-seq data in Flask

freepsi

An alignment-free approach to estimating exon-inclusion ratios without a reference transcriptome

freqgen

Generate DNA sequences with specified amino acid, codon, and k-mer frequencies

galaxy

Data intensive biology for everyone.

galaxy-json-data-source

Data source tool for importing multiple datasets using a JSON schema

gemini

a lightweight db framework for disease and population genetics.

gffutils

GFF and GTF file manipulation and interconversion

hamstring

Tools for generating and decoding error-correcting DNA barcodes

hap.py

Haplotype VCF comparison tools

home-assistant-addons

homebridge-camera-ffmpeg-ufv

UniFi Video plugin for Homebridge

hts-python

pythonic wrapper for libhts

htslib

C library for high-throughput sequencing data formats